dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00515
Location and strand information: 20332 - 23361 (-)
Family: 2.A.6.2.33
Protein type: TC
Protein description: Efflux pump membrane transporter BepE

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00516
Location and strand information: 23377 - 24450 (-)
Family: 2.A.6.2.28
Protein type: TC
Protein description: Solvent efflux pump periplasmic linker SrpA

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00517
Location and strand information: 24777 - 25673 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00518
Location and strand information: 25751 - 26818 (-)
Family: GH43_19|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1173
Protein molecular weight: 40762.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00519
Location and strand information: 26830 - 27519 (-)
Family: null
Protein type: null
Protein description: Acetylxylan esterase

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00520
Location and strand information: 27479 - 27742 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00521
Location and strand information: 27754 - 29037 (-)
Family: 2.A.40.7.6
Protein type: TC
Protein description: Guanine/hypoxanthine permease PbuG

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00522
Location and strand information: 29114 - 29644 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00523
Location and strand information: 29850 - 32723 (+)
Family: GH31
Protein type: CAZyme
Protein description: Alpha-xylosidase BoGH31A
Protein isoelectric point: 6.4269
Protein molecular weight: 109444.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00524
Location and strand information: 32748 - 34958 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3A
Protein isoelectric point: 6.0316
Protein molecular weight: 81578.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00525
Location and strand information: 35340 - 38396 (-)
Family: CBM2|PL11_1|CBM35|PL11
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3673
Protein molecular weight: 112458.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00526
Location and strand information: 38527 - 41649 (-)
Family: CBM2|PL11_1|CBM35|PL11
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3412
Protein molecular weight: 114336.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00527
Location and strand information: 41836 - 42264 (+)
Family: null
Protein type: null
Protein description: Putative pre-16S rRNA nuclease

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00528
Location and strand information: 42261 - 42824 (+)
Family: null
Protein type: null
Protein description: Peptide deformylase

Gene clsuter ID: MGYG000004037_6|CGC1
Gene ID: MGYG000004037_00529
Location and strand information: 42859 - 44544 (+)
Family: 3.A.1.120.5
Protein type: TC
Protein description: Energy-dependent translational throttle protein EttA

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004037_00518	GH43_e71
MGYG000004037_00523	GH31_e72\|3.2.1.177	xyloglucan
MGYG000004037_00524	GH3_e134\|3.2.1.21	beta-glucan
MGYG000004037_00525	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000004037_00526	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004037_00515	Efflux pump membrane transporter BepE	TC	20332	23361	-	2.A.6.2.33
MGYG000004037_00516	Solvent efflux pump periplasmic linker SrpA	TC	23377	24450	-	2.A.6.2.28
MGYG000004037_00517	HTH-type transcriptional activator RhaS	TF	24777	25673	+	HTH_AraC
MGYG000004037_00518	hypothetical protein	CAZyme	25751	26818	-	GH43_19\| GH43
MGYG000004037_00519	Acetylxylan esterase	null	26830	27519	-	Lipase_GDSL_2
MGYG000004037_00520	hypothetical protein	null	27479	27742	-	Acetyltransf_CG
MGYG000004037_00521	Guanine/hypoxanthine permease PbuG	TC	27754	29037	-	2.A.40.7.6
MGYG000004037_00522	hypothetical protein	null	29114	29644	-	SPOR
MGYG000004037_00523	Alpha-xylosidase BoGH31A	CAZyme	29850	32723	+	GH31
MGYG000004037_00524	Beta-glucosidase BoGH3A	CAZyme	32748	34958	+	GH3
MGYG000004037_00525	hypothetical protein	CAZyme	35340	38396	-	CBM2\| PL11_1\| CBM35\| PL11
MGYG000004037_00526	hypothetical protein	CAZyme	38527	41649	-	CBM2\| PL11_1\| CBM35\| PL11
MGYG000004037_00527	Putative pre-16S rRNA nuclease	null	41836	42264	+	RuvX
MGYG000004037_00528	Peptide deformylase	null	42261	42824	+	Pep_deformylase
MGYG000004037_00529	Energy-dependent translational throttle protein EttA	TC	42859	44544	+	3.A.1.120.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature